I have the same exact problem described in, but the answer accepted there is not the right one for me, because the user's home directory is local.I think that I configured everything properly on the client side (Windows 7, PuTTY's PAGEANT, PUTTYGEN and PLINK), yet I don't seem to make the public key mechanism work (password based ssh login works).
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FATAL ERROR: Disconnected: No supported authentication methods available fatal: The remote end hung up unexpectedly. (git push origin master), git was trying to use PUTTY, and when ssh [email protected] it uses ssh client that goes with git install package. So to me the following helped: I reinstalled git, and when the wizard asked what ssh. FreeBSD's default sshd configuration defaults to PAM-based authentication, which includes password auth and public key auth. Also, you can test by ssh-ing from the instance to the instance. Login as ec2-user, then say $ ssh myaccount@localhost or some other appropriate hostname instead of localhost.
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